This commit fixes several critical issues found during comprehensive review:
## CRITICAL FIX: Template Consolidation ⚠️
- Moved 6 commands from ~/.claude/commands/ to templates/commands/
- Moved 3 skills from ~/.claude/skills/ to templates/skills/
- Team sharing was BROKEN without this (symlinks pointed to empty dirs)
- Updated README with prominent consolidation step warning
- Commands: list, remember, save, search, session, triggers
- Skills: initialize-project, remember-this, memory
## HIGH PRIORITY FIXES:
- ✅ Completed selective semantic indexing (removed TODO at line 878)
- ✅ Fixed PostgreSQL references in health check (system uses SQLite)
- ✅ Created comprehensive API documentation (docs/API_REFERENCE.md)
- ✅ Added Depends import to fix authentication endpoints
## DOCUMENTATION:
- Added complete API_REFERENCE.md (60+ endpoints documented)
- Created HYBRID_INDEXING_INTEGRATION.md (5 KB architecture)
- Updated README with API docs link + consolidation warning
- Documented all hybrid indexing endpoints with examples
## IMPROVEMENTS:
- Selective semantic indexing now actually ingests files (was placeholder)
- Health check now correctly queries SQLite instead of PostgreSQL
- All authentication endpoints now functional
- Structural indexing stores as pure JSON (no embeddings)
Impact: Team sharing now works, all features documented, critical bugs fixed.
Tested: Pistn indexing (3,117 files in 3 seconds) ✅🚀 Generated with Claude Code
Co-Authored-By: Claude <noreply@anthropic.com>
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